Test lammps hook by laraPPr · Pull Request #186 · EESSI/software-layer-scripts

laraPPr · 2026-03-24T11:45:31Z

edit: context:

{2025.06}[2024a] LAMMPS v22Jul2025 software-layer#1335

laraPPr · 2026-03-24T11:46:13Z

bot: build repo:eessi.io-2025.06-software instance:eessi-bot-mc-aws for:arch=aarch64/generic

eessi-bot-aws · 2026-03-24T11:46:21Z

New job on instance eessi-bot-mc-aws for repository eessi.io-2025.06-software
Building on: generic
Building for: aarch64/generic
Job dir: /project/def-users/SHARED/jobs/2026.03/pr_186/142466

date	job status	comment
Mar 24 11:46:20 UTC 2026	submitted	job id `142466` awaits release by job manager
Mar 24 11:47:33 UTC 2026	released	job awaits launch by Slurm scheduler
Mar 24 11:52:18 UTC 2026	running	job `142466` is running
Mar 24 11:55:40 UTC 2026	finished	😢 FAILURE (click triangle for details) Details ✅ job output file `slurm-142466.out` ✅ no message matching `FATAL:` ❌ found message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ❌ no message matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2025.06-software-linux-aarch64-generic-17743531570.tar.zst` size: 0 MiB (27354 bytes) entries: 1 modules under 2025.06/software/linux/aarch64/generic/modules/all no module files in tarball software under 2025.06/software/linux/aarch64/generic/software no software packages in tarball reprod directories under 2025.06/software/linux/aarch64/generic/reprod no reprod directories in tarball other under 2025.06/software/linux/aarch64/generic `2025.06/init/easybuild/eb_hooks.py`
Mar 24 11:55:40 UTC 2026	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ OK ] (1/4) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /e4bf9965 @BotBuildTests:aarch64-generic+default P: latency: 2.03 us (r:0, l:None, u:None) [ OK ] (2/4) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /3da4890b @BotBuildTests:aarch64-generic+default P: latency: 5.43 us (r:0, l:None, u:None) [ OK ] (3/4) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /3255009a @BotBuildTests:aarch64-generic+default P: latency: 0.3 us (r:0, l:None, u:None) [ OK ] (4/4) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /59f4b331 @BotBuildTests:aarch64-generic+default P: bandwidth: 15329.45 MB/s (r:0, l:None, u:None) [ PASSED ] Ran 4/4 test case(s) from 4 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-142466.out` ❌ found message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`

laraPPr · 2026-03-24T12:04:06Z

bot: build repo:eessi.io-2025.06-software instance:eessi-bot-mc-aws for:arch=aarch64/generic

eessi-bot-aws · 2026-03-24T12:04:14Z

New job on instance eessi-bot-mc-aws for repository eessi.io-2025.06-software
Building on: generic
Building for: aarch64/generic
Job dir: /project/def-users/SHARED/jobs/2026.03/pr_186/142467

date	job status	comment
Mar 24 12:04:13 UTC 2026	submitted	job id `142467` awaits release by job manager
Mar 24 12:05:29 UTC 2026	released	job awaits launch by Slurm scheduler
Mar 24 12:07:02 UTC 2026	running	job `142467` is running
Mar 24 12:56:46 UTC 2026	finished	😢 FAILURE (click triangle for details) Details ✅ job output file `slurm-142467.out` ✅ no message matching `FATAL:` ❌ found message matching `ERROR:` ✅ no message matching `FAILED:` ❌ found message matching `required modules missing:` ❌ no message matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2025.06-software-linux-aarch64-generic-17743569010.tar.zst` size: 17 MiB (18596014 bytes) entries: 1733 modules under 2025.06/software/linux/aarch64/generic/modules/all `archspec/0.2.5-GCCcore-13.3.0.lua` `kim-api/2.4.1-GCC-13.3.0.lua` `MDI/1.4.26-gompi-2024a.lua` `mpi4py/4.0.1-gompi-2024a.lua` `PLUMED/2.9.3-foss-2024a.lua` `tbb/2021.13.0-GCCcore-13.3.0.lua` `Voro++/0.4.6-GCCcore-13.3.0.lua` `xxd/9.1.1275-GCCcore-13.3.0.lua` software under 2025.06/software/linux/aarch64/generic/software `archspec/0.2.5-GCCcore-13.3.0` `kim-api/2.4.1-GCC-13.3.0` `MDI/1.4.26-gompi-2024a` `mpi4py/4.0.1-gompi-2024a` `PLUMED/2.9.3-foss-2024a` `tbb/2021.13.0-GCCcore-13.3.0` `Voro++/0.4.6-GCCcore-13.3.0` `xxd/9.1.1275-GCCcore-13.3.0` reprod directories under 2025.06/software/linux/aarch64/generic/reprod `archspec/0.2.5-GCCcore-13.3.0/20260324_120840UTC` `kim-api/2.4.1-GCC-13.3.0/20260324_120822UTC` `MDI/1.4.26-gompi-2024a/20260324_120942UTC` `mpi4py/4.0.1-gompi-2024a/20260324_122417UTC` `PLUMED/2.9.3-foss-2024a/20260324_121754UTC` `tbb/2021.13.0-GCCcore-13.3.0/20260324_122808UTC` `Voro++/0.4.6-GCCcore-13.3.0/20260324_120853UTC` `xxd/9.1.1275-GCCcore-13.3.0/20260324_120947UTC` other under 2025.06/software/linux/aarch64/generic `2025.06/init/easybuild/eb_hooks.py`
Mar 24 12:56:46 UTC 2026	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ OK ] (1/4) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /e4bf9965 @BotBuildTests:aarch64-generic+default P: latency: 1.96 us (r:0, l:None, u:None) [ OK ] (2/4) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /3da4890b @BotBuildTests:aarch64-generic+default P: latency: 5.44 us (r:0, l:None, u:None) [ OK ] (3/4) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /3255009a @BotBuildTests:aarch64-generic+default P: latency: 0.29 us (r:0, l:None, u:None) [ OK ] (4/4) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /59f4b331 @BotBuildTests:aarch64-generic+default P: bandwidth: 15908.17 MB/s (r:0, l:None, u:None) [ PASSED ] Ran 4/4 test case(s) from 4 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-142467.out` ❌ found message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`

laraPPr · 2026-03-24T13:08:58Z

bot: build repo:eessi.io-2025.06-software instance:eessi-bot-mc-aws for:arch=aarch64/generic

eessi-bot-aws · 2026-03-24T13:09:06Z

New job on instance eessi-bot-mc-aws for repository eessi.io-2025.06-software
Building on: generic
Building for: aarch64/generic
Job dir: /project/def-users/SHARED/jobs/2026.03/pr_186/142468

date	job status	comment
Mar 24 13:09:05 UTC 2026	submitted	job id `142468` awaits release by job manager
Mar 24 13:09:55 UTC 2026	released	job awaits launch by Slurm scheduler
Mar 24 13:11:03 UTC 2026	running	job `142468` is running
Mar 24 14:37:07 UTC 2026	finished	😢 FAILURE (click triangle for details) Details ✅ job output file `slurm-142468.out` ✅ no message matching `FATAL:` ❌ found message matching `ERROR:` ❌ found message matching `FAILED:` ❌ found message matching `required modules missing:` ❌ no message matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2025.06-software-linux-aarch64-generic-17743629400.tar.zst` size: 17 MiB (18595309 bytes) entries: 1733 modules under 2025.06/software/linux/aarch64/generic/modules/all `archspec/0.2.5-GCCcore-13.3.0.lua` `kim-api/2.4.1-GCC-13.3.0.lua` `MDI/1.4.26-gompi-2024a.lua` `mpi4py/4.0.1-gompi-2024a.lua` `PLUMED/2.9.3-foss-2024a.lua` `tbb/2021.13.0-GCCcore-13.3.0.lua` `Voro++/0.4.6-GCCcore-13.3.0.lua` `xxd/9.1.1275-GCCcore-13.3.0.lua` software under 2025.06/software/linux/aarch64/generic/software `archspec/0.2.5-GCCcore-13.3.0` `kim-api/2.4.1-GCC-13.3.0` `MDI/1.4.26-gompi-2024a` `mpi4py/4.0.1-gompi-2024a` `PLUMED/2.9.3-foss-2024a` `tbb/2021.13.0-GCCcore-13.3.0` `Voro++/0.4.6-GCCcore-13.3.0` `xxd/9.1.1275-GCCcore-13.3.0` reprod directories under 2025.06/software/linux/aarch64/generic/reprod `archspec/0.2.5-GCCcore-13.3.0/20260324_131302UTC` `kim-api/2.4.1-GCC-13.3.0/20260324_131244UTC` `MDI/1.4.26-gompi-2024a/20260324_131403UTC` `mpi4py/4.0.1-gompi-2024a/20260324_132840UTC` `PLUMED/2.9.3-foss-2024a/20260324_132215UTC` `tbb/2021.13.0-GCCcore-13.3.0/20260324_133235UTC` `Voro++/0.4.6-GCCcore-13.3.0/20260324_131315UTC` `xxd/9.1.1275-GCCcore-13.3.0/20260324_131408UTC` other under 2025.06/software/linux/aarch64/generic `2025.06/init/easybuild/eb_hooks.py`
Mar 24 14:37:07 UTC 2026	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ OK ] (1/4) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /e4bf9965 @BotBuildTests:aarch64-generic+default P: latency: 1.99 us (r:0, l:None, u:None) [ OK ] (2/4) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /3da4890b @BotBuildTests:aarch64-generic+default P: latency: 5.53 us (r:0, l:None, u:None) [ OK ] (3/4) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /3255009a @BotBuildTests:aarch64-generic+default P: latency: 0.28 us (r:0, l:None, u:None) [ OK ] (4/4) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /59f4b331 @BotBuildTests:aarch64-generic+default P: bandwidth: 15749.18 MB/s (r:0, l:None, u:None) [ PASSED ] Ran 4/4 test case(s) from 4 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-142468.out` ❌ found message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`

eb_hooks.py

laraPPr · 2026-03-26T12:03:13Z

bot: build repo:eessi.io-2025.06-software instance:eessi-bot-mc-aws for:arch=aarch64/generic

eessi-bot-aws · 2026-03-26T12:03:20Z

New job on instance eessi-bot-mc-aws for repository eessi.io-2025.06-software
Building on: generic
Building for: aarch64/generic
Job dir: /project/def-users/SHARED/jobs/2026.03/pr_186/143061

date	job status	comment
Mar 26 12:03:19 UTC 2026	submitted	job id `143061` awaits release by job manager
Mar 26 12:03:25 UTC 2026	released	job awaits launch by Slurm scheduler
Mar 26 12:09:28 UTC 2026	running	job `143061` is running
Mar 26 13:41:34 UTC 2026	finished	😢 FAILURE (click triangle for details) Details ✅ job output file `slurm-143061.out` ✅ no message matching `FATAL:` ❌ found message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2025.06-software-linux-aarch64-generic-17745323560.tar.zst` size: 173 MiB (182060748 bytes) entries: 6773 modules under 2025.06/software/linux/aarch64/generic/modules/all `archspec/0.2.5-GCCcore-13.3.0.lua` `kim-api/2.4.1-GCC-13.3.0.lua` `LAMMPS/22Jul2025-foss-2024a-kokkos.lua` `MDI/1.4.26-gompi-2024a.lua` `mpi4py/4.0.1-gompi-2024a.lua` `PLUMED/2.9.3-foss-2024a.lua` `tbb/2021.13.0-GCCcore-13.3.0.lua` `Voro++/0.4.6-GCCcore-13.3.0.lua` `xxd/9.1.1275-GCCcore-13.3.0.lua` software under 2025.06/software/linux/aarch64/generic/software `archspec/0.2.5-GCCcore-13.3.0` `kim-api/2.4.1-GCC-13.3.0` `LAMMPS/22Jul2025-foss-2024a-kokkos` `MDI/1.4.26-gompi-2024a` `mpi4py/4.0.1-gompi-2024a` `PLUMED/2.9.3-foss-2024a` `tbb/2021.13.0-GCCcore-13.3.0` `Voro++/0.4.6-GCCcore-13.3.0` `xxd/9.1.1275-GCCcore-13.3.0` reprod directories under 2025.06/software/linux/aarch64/generic/reprod `archspec/0.2.5-GCCcore-13.3.0/20260326_121157UTC` `kim-api/2.4.1-GCC-13.3.0/20260326_121138UTC` `LAMMPS/22Jul2025-foss-2024a-kokkos/20260326_133855UTC` `MDI/1.4.26-gompi-2024a/20260326_121301UTC` `mpi4py/4.0.1-gompi-2024a/20260326_122753UTC` `PLUMED/2.9.3-foss-2024a/20260326_122127UTC` `tbb/2021.13.0-GCCcore-13.3.0/20260326_123145UTC` `Voro++/0.4.6-GCCcore-13.3.0/20260326_121211UTC` `xxd/9.1.1275-GCCcore-13.3.0/20260326_121307UTC` other under 2025.06/software/linux/aarch64/generic `2025.06/init/easybuild/eb_hooks.py`
Mar 26 13:41:34 UTC 2026	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ OK ] (1/4) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /e4bf9965 @BotBuildTests:aarch64-generic+default P: latency: 1.98 us (r:0, l:None, u:None) [ OK ] (2/4) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /3da4890b @BotBuildTests:aarch64-generic+default P: latency: 5.5 us (r:0, l:None, u:None) [ OK ] (3/4) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /3255009a @BotBuildTests:aarch64-generic+default P: latency: 0.28 us (r:0, l:None, u:None) [ OK ] (4/4) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /59f4b331 @BotBuildTests:aarch64-generic+default P: bandwidth: 16363.85 MB/s (r:0, l:None, u:None) [ PASSED ] Ran 4/4 test case(s) from 4 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-143061.out` ❌ found message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`

laraPPr · 2026-03-26T13:49:07Z

bot: build repo:eessi.io-2025.06-software instance:eessi-bot-mc-aws for:arch=aarch64/generic

eessi-bot-aws · 2026-03-26T13:49:16Z

New job on instance eessi-bot-mc-aws for repository eessi.io-2025.06-software
Building on: generic
Building for: aarch64/generic
Job dir: /project/def-users/SHARED/jobs/2026.03/pr_186/143063

date	job status	comment
Mar 26 13:49:14 UTC 2026	submitted	job id `143063` awaits release by job manager
Mar 26 13:49:38 UTC 2026	released	job awaits launch by Slurm scheduler
Mar 26 13:50:41 UTC 2026	running	job `143063` is running
Mar 26 15:21:15 UTC 2026	finished	😢 FAILURE (click triangle for details) Details ✅ job output file `slurm-143063.out` ✅ no message matching `FATAL:` ❌ found message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2025.06-software-linux-aarch64-generic-17745383550.tar.zst` size: 173 MiB (182280113 bytes) entries: 6773 modules under 2025.06/software/linux/aarch64/generic/modules/all `archspec/0.2.5-GCCcore-13.3.0.lua` `kim-api/2.4.1-GCC-13.3.0.lua` `LAMMPS/22Jul2025-foss-2024a-kokkos.lua` `MDI/1.4.26-gompi-2024a.lua` `mpi4py/4.0.1-gompi-2024a.lua` `PLUMED/2.9.3-foss-2024a.lua` `tbb/2021.13.0-GCCcore-13.3.0.lua` `Voro++/0.4.6-GCCcore-13.3.0.lua` `xxd/9.1.1275-GCCcore-13.3.0.lua` software under 2025.06/software/linux/aarch64/generic/software `archspec/0.2.5-GCCcore-13.3.0` `kim-api/2.4.1-GCC-13.3.0` `LAMMPS/22Jul2025-foss-2024a-kokkos` `MDI/1.4.26-gompi-2024a` `mpi4py/4.0.1-gompi-2024a` `PLUMED/2.9.3-foss-2024a` `tbb/2021.13.0-GCCcore-13.3.0` `Voro++/0.4.6-GCCcore-13.3.0` `xxd/9.1.1275-GCCcore-13.3.0` reprod directories under 2025.06/software/linux/aarch64/generic/reprod `archspec/0.2.5-GCCcore-13.3.0/20260326_135254UTC` `kim-api/2.4.1-GCC-13.3.0/20260326_135234UTC` `LAMMPS/22Jul2025-foss-2024a-kokkos/20260326_151839UTC` `MDI/1.4.26-gompi-2024a/20260326_135357UTC` `mpi4py/4.0.1-gompi-2024a/20260326_140844UTC` `PLUMED/2.9.3-foss-2024a/20260326_140217UTC` `tbb/2021.13.0-GCCcore-13.3.0/20260326_141236UTC` `Voro++/0.4.6-GCCcore-13.3.0/20260326_135307UTC` `xxd/9.1.1275-GCCcore-13.3.0/20260326_135402UTC` other under 2025.06/software/linux/aarch64/generic `2025.06/init/easybuild/eb_hooks.py`
Mar 26 15:21:15 UTC 2026	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ OK ] (1/4) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /e4bf9965 @BotBuildTests:aarch64-generic+default P: latency: 1.99 us (r:0, l:None, u:None) [ OK ] (2/4) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /3da4890b @BotBuildTests:aarch64-generic+default P: latency: 5.34 us (r:0, l:None, u:None) [ OK ] (3/4) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /3255009a @BotBuildTests:aarch64-generic+default P: latency: 0.27 us (r:0, l:None, u:None) [ OK ] (4/4) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /59f4b331 @BotBuildTests:aarch64-generic+default P: bandwidth: 16281.79 MB/s (r:0, l:None, u:None) [ PASSED ] Ran 4/4 test case(s) from 4 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-143063.out` ❌ found message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`

laraPPr · 2026-03-26T15:28:24Z

@boegel reseting the build_option('ignore_test_failure') does not seem to work for the ctests.

Debug:  aarch64/generic

I will reset ignore_test_failure

True

  >> running shell command:

        ctest --no-tests=error -LE unstable -E "TestMliapPyUnified|AtomicPairStyle:meam_spline|KSpaceStyle:scafacos.*"

        [started at: 2026-03-26 14:39:33]

        [working dir: /tmp/bot/easybuild/build/LAMMPS/22Jul2025/foss-2024a-kokkos/easybuild_obj]

        [output and state saved to /tmp/eb-y9ggyhns/eb-zvsx12zv/run-shell-cmd-output/ctest-h9tdkuoe]





ERROR: Shell command failed!

    full command              ->  ctest --no-tests=error -LE unstable -E

"TestMliapPyUnified|AtomicPairStyle:meam_spline|KSpaceStyle:scafacos.*"

    exit code                 ->  8

    called from               ->  'test_step' function in

/cvmfs/software.eessi.io/versions/2025.06/software/linux/aarch64/generic/softwar

e/EasyBuild/5.2.1/lib/python3.13/site-packages/easybuild/easyblocks/generic/conf

iguremake.py (line 401)

    working directory         ->

/tmp/bot/easybuild/build/LAMMPS/22Jul2025/foss-2024a-kokkos/easybuild_obj

    output (stdout + stderr)  ->

/tmp/eb-y9ggyhns/eb-zvsx12zv/run-shell-cmd-output/ctest-h9tdkuoe/out.txt

    interactive shell script  ->

/tmp/eb-y9ggyhns/eb-zvsx12zv/run-shell-cmd-output/ctest-h9tdkuoe/cmd.sh





WARNING: Test failure ignored: shell command 'ctest ...' failed in test step for LAMMPS-22Jul2025-foss-2024a-kokkos.eb

easystacks/software.eessi.io/2025.06/eessi-2025.06-eb-5.2.1-2024a.yml

laraPPr · 2026-03-26T15:30:24Z

bot: build repo:eessi.io-2025.06-software instance:eessi-bot-mc-aws for:arch=aarch64/generic

eessi-bot-aws · 2026-03-26T15:30:33Z

New job on instance eessi-bot-mc-aws for repository eessi.io-2025.06-software
Building on: generic
Building for: aarch64/generic
Job dir: /project/def-users/SHARED/jobs/2026.03/pr_186/143066

date	job status	comment
Mar 26 15:30:32 UTC 2026	submitted	job id `143066` awaits release by job manager
Mar 26 15:31:19 UTC 2026	released	job awaits launch by Slurm scheduler
Mar 26 15:32:22 UTC 2026	running	job `143066` is running
Mar 26 17:02:37 UTC 2026	finished	😢 FAILURE (click triangle for details) Details ✅ job output file `slurm-143066.out` ✅ no message matching `FATAL:` ❌ found message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2025.06-software-linux-aarch64-generic-17745444580.tar.zst` size: 173 MiB (182282260 bytes) entries: 6773 modules under 2025.06/software/linux/aarch64/generic/modules/all `archspec/0.2.5-GCCcore-13.3.0.lua` `kim-api/2.4.1-GCC-13.3.0.lua` `LAMMPS/22Jul2025-foss-2024a-kokkos.lua` `MDI/1.4.26-gompi-2024a.lua` `mpi4py/4.0.1-gompi-2024a.lua` `PLUMED/2.9.3-foss-2024a.lua` `tbb/2021.13.0-GCCcore-13.3.0.lua` `Voro++/0.4.6-GCCcore-13.3.0.lua` `xxd/9.1.1275-GCCcore-13.3.0.lua` software under 2025.06/software/linux/aarch64/generic/software `archspec/0.2.5-GCCcore-13.3.0` `kim-api/2.4.1-GCC-13.3.0` `LAMMPS/22Jul2025-foss-2024a-kokkos` `MDI/1.4.26-gompi-2024a` `mpi4py/4.0.1-gompi-2024a` `PLUMED/2.9.3-foss-2024a` `tbb/2021.13.0-GCCcore-13.3.0` `Voro++/0.4.6-GCCcore-13.3.0` `xxd/9.1.1275-GCCcore-13.3.0` reprod directories under 2025.06/software/linux/aarch64/generic/reprod `archspec/0.2.5-GCCcore-13.3.0/20260326_153430UTC` `kim-api/2.4.1-GCC-13.3.0/20260326_153412UTC` `LAMMPS/22Jul2025-foss-2024a-kokkos/20260326_170037UTC` `MDI/1.4.26-gompi-2024a/20260326_153534UTC` `mpi4py/4.0.1-gompi-2024a/20260326_155020UTC` `PLUMED/2.9.3-foss-2024a/20260326_154355UTC` `tbb/2021.13.0-GCCcore-13.3.0/20260326_155413UTC` `Voro++/0.4.6-GCCcore-13.3.0/20260326_153444UTC` `xxd/9.1.1275-GCCcore-13.3.0/20260326_153539UTC` other under 2025.06/software/linux/aarch64/generic `2025.06/init/easybuild/eb_hooks.py`
Mar 26 17:02:37 UTC 2026	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ OK ] (1/4) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /e4bf9965 @BotBuildTests:aarch64-generic+default P: latency: 1.9 us (r:0, l:None, u:None) [ OK ] (2/4) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /3da4890b @BotBuildTests:aarch64-generic+default P: latency: 5.36 us (r:0, l:None, u:None) [ OK ] (3/4) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /3255009a @BotBuildTests:aarch64-generic+default P: latency: 0.3 us (r:0, l:None, u:None) [ OK ] (4/4) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /59f4b331 @BotBuildTests:aarch64-generic+default P: bandwidth: 16228.94 MB/s (r:0, l:None, u:None) [ PASSED ] Ran 4/4 test case(s) from 4 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-143066.out` ❌ found message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`

boegel · 2026-03-27T07:51:06Z

eb_hooks.py

+            print(build_option('ignore_test_failure'))
+
+
+def post_test_hook(self, *args, **kwargs):


@laraPPr Due to where ignore_test_failure is being picked up, rolling back to the original value in post_test_hook is too early.

Try doing it in post_easyblock_hook instead (so at the very end of the LAMMPS installation)?

boegel · 2026-03-27T07:51:45Z

eb_hooks.py

+        print('Debug: ', cpu_target)
+        if cpu_target == CPU_TARGET_AARCH64_GENERIC:
+            print('I will reset ignore_test_failure')
+            self.orig_ignore_test_failure = build_option('ignore_test_failure')


You should do this outside of the ifs, so self.orig_ignore_test_failure is always defined, or you'll cause a hard crash on CPU targets other than aarch64/generic

easystacks/software.eessi.io/2025.06/eessi-2025.06-eb-5.2.1-2024a.yml

Co-authored-by: Lara Ramona Peeters <49882639+laraPPr@users.noreply.github.com>

laraPPr · 2026-03-27T08:51:08Z

bot: build repo:eessi.io-2025.06-software instance:eessi-bot-mc-aws for:arch=aarch64/generic

eessi-bot-aws · 2026-03-27T08:51:14Z

New job on instance eessi-bot-mc-aws for repository eessi.io-2025.06-software
Building on: generic
Building for: aarch64/generic
Job dir: /project/def-users/SHARED/jobs/2026.03/pr_186/143355

date	job status	comment
Mar 27 08:51:13 UTC 2026	submitted	job id `143355` awaits release by job manager
Mar 27 08:51:56 UTC 2026	released	job awaits launch by Slurm scheduler
Mar 27 08:56:58 UTC 2026	running	job `143355` is running
Mar 27 10:27:58 UTC 2026	finished	😢 FAILURE (click triangle for details) Details ✅ job output file `slurm-143355.out` ✅ no message matching `FATAL:` ❌ found message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2025.06-software-linux-aarch64-generic-17746071920.tar.zst` size: 173 MiB (182276816 bytes) entries: 6773 modules under 2025.06/software/linux/aarch64/generic/modules/all `archspec/0.2.5-GCCcore-13.3.0.lua` `kim-api/2.4.1-GCC-13.3.0.lua` `LAMMPS/22Jul2025-foss-2024a-kokkos.lua` `MDI/1.4.26-gompi-2024a.lua` `mpi4py/4.0.1-gompi-2024a.lua` `PLUMED/2.9.3-foss-2024a.lua` `tbb/2021.13.0-GCCcore-13.3.0.lua` `Voro++/0.4.6-GCCcore-13.3.0.lua` `xxd/9.1.1275-GCCcore-13.3.0.lua` software under 2025.06/software/linux/aarch64/generic/software `archspec/0.2.5-GCCcore-13.3.0` `kim-api/2.4.1-GCC-13.3.0` `LAMMPS/22Jul2025-foss-2024a-kokkos` `MDI/1.4.26-gompi-2024a` `mpi4py/4.0.1-gompi-2024a` `PLUMED/2.9.3-foss-2024a` `tbb/2021.13.0-GCCcore-13.3.0` `Voro++/0.4.6-GCCcore-13.3.0` `xxd/9.1.1275-GCCcore-13.3.0` reprod directories under 2025.06/software/linux/aarch64/generic/reprod `archspec/0.2.5-GCCcore-13.3.0/20260327_085928UTC` `kim-api/2.4.1-GCC-13.3.0/20260327_085910UTC` `LAMMPS/22Jul2025-foss-2024a-kokkos/20260327_102610UTC` `MDI/1.4.26-gompi-2024a/20260327_090033UTC` `mpi4py/4.0.1-gompi-2024a/20260327_091527UTC` `PLUMED/2.9.3-foss-2024a/20260327_090858UTC` `tbb/2021.13.0-GCCcore-13.3.0/20260327_091921UTC` `Voro++/0.4.6-GCCcore-13.3.0/20260327_085942UTC` `xxd/9.1.1275-GCCcore-13.3.0/20260327_090038UTC` other under 2025.06/software/linux/aarch64/generic `2025.06/init/easybuild/eb_hooks.py`
Mar 27 10:27:58 UTC 2026	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ OK ] (1/4) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /e4bf9965 @BotBuildTests:aarch64-generic+default P: latency: 1.98 us (r:0, l:None, u:None) [ OK ] (2/4) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /3da4890b @BotBuildTests:aarch64-generic+default P: latency: 5.44 us (r:0, l:None, u:None) [ OK ] (3/4) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /3255009a @BotBuildTests:aarch64-generic+default P: latency: 0.29 us (r:0, l:None, u:None) [ OK ] (4/4) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /59f4b331 @BotBuildTests:aarch64-generic+default P: bandwidth: 15885.81 MB/s (r:0, l:None, u:None) [ PASSED ] Ran 4/4 test case(s) from 4 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-143355.out` ❌ found message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`

laraPPr · 2026-03-27T11:43:31Z

The installation is succesfull. LAMMPS is in the tarball. It just finds ERROR in the slurm.out but the installation keeps going.

== Running pre-test hook...

build option before pre_test_hooki:  True

Debug:  aarch64/generic

I will reset ignore_test_failure

True

  >> running shell command:

        ctest --no-tests=error -LE unstable -E "TestMliapPyUnified|AtomicPairStyle:meam_spline|KSpaceStyle:scafacos.*"

        [started at: 2026-03-26 16:21:17]

        [working dir: /tmp/bot/easybuild/build/LAMMPS/22Jul2025/foss-2024a-kokkos/easybuild_obj]

        [output and state saved to /tmp/eb-xwkpiguu/eb-g7dfzrnf/run-shell-cmd-output/ctest-filcza7i]





ERROR: Shell command failed!

    full command              ->  ctest --no-tests=error -LE unstable -E

"TestMliapPyUnified|AtomicPairStyle:meam_spline|KSpaceStyle:scafacos.*"

    exit code                 ->  8

    called from               ->  'test_step' function in

/cvmfs/software.eessi.io/versions/2025.06/software/linux/aarch64/generic/softwar

e/EasyBuild/5.2.1/lib/python3.13/site-packages/easybuild/easyblocks/generic/conf

iguremake.py (line 401)

    working directory         ->

/tmp/bot/easybuild/build/LAMMPS/22Jul2025/foss-2024a-kokkos/easybuild_obj

    output (stdout + stderr)  ->

/tmp/eb-xwkpiguu/eb-g7dfzrnf/run-shell-cmd-output/ctest-filcza7i/out.txt

    interactive shell script  ->

/tmp/eb-xwkpiguu/eb-g7dfzrnf/run-shell-cmd-output/ctest-filcza7i/cmd.sh





WARNING: Test failure ignored: shell command 'ctest ...' failed in test step for LAMMPS-22Jul2025-foss-2024a-kokkos.eb



== Running post-test hook...

== ... (took 36 mins 44 secs)

== installing...

  >> running shell command:

        make install

        [started at: 2026-03-26 16:58:01]

        [working dir: /tmp/bot/easybuild/build/LAMMPS/22Jul2025/foss-2024a-kokkos/easybuild_obj]

        [output and state saved to /tmp/eb-xwkpiguu/eb-g7dfzrnf/run-shell-cmd-output/make-zuvrgj4e]

laraPPr · 2026-03-27T14:45:19Z

bot: build repo:eessi.io-2025.06-software instance:eessi-bot-mc-aws for:arch=aarch64/generic

eessi-bot-aws · 2026-03-27T14:45:26Z

New job on instance eessi-bot-mc-aws for repository eessi.io-2025.06-software
Building on: generic
Building for: aarch64/generic
Job dir: /project/def-users/SHARED/jobs/2026.03/pr_186/143356

date	job status	comment
Mar 27 14:45:24 UTC 2026	submitted	job id `143356` awaits release by job manager
Mar 27 14:46:23 UTC 2026	released	job awaits launch by Slurm scheduler
Mar 27 14:52:25 UTC 2026	running	job `143356` is running
Mar 27 16:20:33 UTC 2026	finished	😢 FAILURE (click triangle for details) Details ✅ job output file `slurm-143356.out` ✅ no message matching `FATAL:` ❌ found message matching `ERROR:` ❌ found message matching `FAILED:` ❌ found message matching `required modules missing:` ❌ no message matching `No missing installations` ✅ found message matching `.tar.* created!` Artefacts `eessi-2025.06-software-linux-aarch64-generic-17746283190.tar.zst` size: 17 MiB (18603352 bytes) entries: 1733 modules under 2025.06/software/linux/aarch64/generic/modules/all `archspec/0.2.5-GCCcore-13.3.0.lua` `kim-api/2.4.1-GCC-13.3.0.lua` `MDI/1.4.26-gompi-2024a.lua` `mpi4py/4.0.1-gompi-2024a.lua` `PLUMED/2.9.3-foss-2024a.lua` `tbb/2021.13.0-GCCcore-13.3.0.lua` `Voro++/0.4.6-GCCcore-13.3.0.lua` `xxd/9.1.1275-GCCcore-13.3.0.lua` software under 2025.06/software/linux/aarch64/generic/software `archspec/0.2.5-GCCcore-13.3.0` `kim-api/2.4.1-GCC-13.3.0` `MDI/1.4.26-gompi-2024a` `mpi4py/4.0.1-gompi-2024a` `PLUMED/2.9.3-foss-2024a` `tbb/2021.13.0-GCCcore-13.3.0` `Voro++/0.4.6-GCCcore-13.3.0` `xxd/9.1.1275-GCCcore-13.3.0` reprod directories under 2025.06/software/linux/aarch64/generic/reprod `archspec/0.2.5-GCCcore-13.3.0/20260327_145503UTC` `kim-api/2.4.1-GCC-13.3.0/20260327_145443UTC` `MDI/1.4.26-gompi-2024a/20260327_145607UTC` `mpi4py/4.0.1-gompi-2024a/20260327_151106UTC` `PLUMED/2.9.3-foss-2024a/20260327_150430UTC` `tbb/2021.13.0-GCCcore-13.3.0/20260327_151501UTC` `Voro++/0.4.6-GCCcore-13.3.0/20260327_145517UTC` `xxd/9.1.1275-GCCcore-13.3.0/20260327_145613UTC` other under 2025.06/software/linux/aarch64/generic `2025.06/init/easybuild/eb_hooks.py`
Mar 27 16:20:33 UTC 2026	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ OK ] (1/4) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /e4bf9965 @BotBuildTests:aarch64-generic+default P: latency: 1.96 us (r:0, l:None, u:None) [ OK ] (2/4) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node %device_type=cpu /3da4890b @BotBuildTests:aarch64-generic+default P: latency: 5.48 us (r:0, l:None, u:None) [ OK ] (3/4) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /3255009a @BotBuildTests:aarch64-generic+default P: latency: 0.3 us (r:0, l:None, u:None) [ OK ] (4/4) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.5-gompi-2025a %scale=1_node /59f4b331 @BotBuildTests:aarch64-generic+default P: bandwidth: 15725.56 MB/s (r:0, l:None, u:None) [ PASSED ] Ran 4/4 test case(s) from 4 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-143356.out` ❌ found message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`

laraPPr added 2 commits March 24, 2026 12:37

Add LAMMPS hook to ignore failing ctest on ARM generic

78d6a88

add easystack for testing

6041094

laraPPr added 2 commits March 24, 2026 13:03

fix indentation

1f7dce2

Merge branch 'lammps_hook' into test_lammps_hook

b3bc87f

laraPPr added 2 commits March 24, 2026 14:05

fix hook

db5b854

Merge branch 'lammps_hook' into test_lammps_hook

0fc7eb8

boegel reviewed Mar 24, 2026

View reviewed changes

eb_hooks.py Outdated Show resolved Hide resolved

laraPPr added 4 commits March 26, 2026 12:53

fix hook

c595f7c

Merge branch 'lammps_hook' into test_lammps_hook

83d415f

apply @boegel suggestion

e80b897

Merge branch 'lammps_hook' into test_lammps_hook

13ddf4e

adding some debug messages to see if hook is properly picked up

a45ad67

laraPPr commented Mar 26, 2026

View reviewed changes

easystacks/software.eessi.io/2025.06/eessi-2025.06-eb-5.2.1-2024a.yml Show resolved Hide resolved

try if passing it in the easystack does work

87596c8

boegel requested changes Mar 27, 2026

View reviewed changes

laraPPr commented Mar 27, 2026

View reviewed changes

easystacks/software.eessi.io/2025.06/eessi-2025.06-eb-5.2.1-2024a.yml Outdated Show resolved Hide resolved

Apply suggestions from code review

8bd8c41

Co-authored-by: Lara Ramona Peeters <49882639+laraPPr@users.noreply.github.com>

laraPPr added 2 commits March 27, 2026 09:49

move the reset of the ignore_test_failure to post_easyblock_hook

a76c78d

Merge branch 'lammps_hook' into test_lammps_hook

f8541da

laraPPr marked this pull request as draft March 27, 2026 11:46

laraPPr mentioned this pull request Mar 27, 2026

ignore test failure for LAMMPS 22Jul2025 on Aarch64 generic #194

Open

laraPPr and others added 5 commits March 27, 2026 15:24

use pre_run_shell_cmd_hook instead of ignore_test_failure

ac865ed

Merge branch 'lammps_hook' into test_lammps_hook

31eb3c3

Merge branch 'EESSI:main' into lammps_hook

5ad22cb

use pre_run_shell_cmd_hook instead of ignore_test_failure

7b211de

resolve merge conflixt

773613b

laraPPr marked this pull request as ready for review March 27, 2026 14:45

		print(build_option('ignore_test_failure'))


		def post_test_hook(self, args, *kwargs):

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